bio
the domain of the living. bio covers everything that self-replicates, metabolizes, and evolves: from archaeal cells in deep-sea vents to fungi networks in forest soil to the superorganism patterns of social insects. not biology-the-textbook — bio is the phenomenon of matter organizing itself into self-maintaining, self-reproducing, adapting systems
for cyber, bio is both teacher and student. teacher: evolution invented distributed intelligence long before blockchains. mycorrhizal networks share nutrients across trees without central coordination — a biological cybergraph. student: the crystal curates hundreds of species pages because a superintelligence must know life to serve it. the graph contains moringa oleifera, cannabis sativa, apis cerana, gallus gallus domesticus, saccharomyces cerevisiae — each a node in the biosphere
scope
replication — DNA, transcription, mitosis, meiosis, genetics. the machinery of copying and variation. every organism is a proof that its lineage survived selection
organisms — species, animals, plants, fungi, algae, insects, birds, fish. the diversity of living forms. the graph hosts hundreds of species pages from orchidaceae to psilocybe to sequoiadendron giganteum
evolution — Cambrian explosion, extinction event, adaptation, natural selection. the algorithm that life runs: vary, select, inherit. Charles Darwin saw it; genetics mechanized it
cells and metabolism — apoptosis, photosynthesis, fermentation, proteins, cellulose, polysaccharides. the biochemical substrate. life is chemistry that remembers its own recipes
applied bio — medicine, agriculture, permaculture, seeds, composting, propagate plants, harvest. humans applying biological knowledge. cyber valley is a living bio laboratory: tropical rainforest terrain, hundreds of cultivated species
bridges
- bio → chemo: life is chemistry. proteins, alkaloids, flavonoids are molecular explanations of biological function
- bio → eco: organisms form ecosystems. symbiosis, food webs, succession are bio at the population level
- bio → neuro: nervous systems are biological organs. brain, axon, thalamus emerge from cellular biology
- bio → energo: metabolism is energy management. photosynthesis and respiration are thermodynamic processes
- bio → ai: neural networks are inspired by biological neurons. evolution is the original optimization algorithm
- bio → cyber: the biosphere is the original knowledge graph — species linked by co-evolution, symbiosis, and nutrient flow